<?xml version="1.0" encoding="UTF-8"?>
<compound>
  <version>1.0</version>
  <creation_date>2011-09-21 01:25:40 UTC</creation_date>
  <update_date>2015-07-21 06:59:08 UTC</update_date>
  <accession>FDB027513</accession>
  <name>(23S)-23,25-Dihydroxy-24-oxovitamine D3 23-(beta-glucuronide)</name>
  <description>(23S)-23,25-dihdroxy-24-oxovitamine D3 23-(beta-glucuronide) is a natural human metabolite of (23S)-23,25-dihdroxy-24-oxovitamine D3 generated in the liver by UDP glucuonyltransferase.  
Glucuronidation is used to assist in the excretion of toxic substances, drugs or other substances that cannot be used as an energy source. Glucuronic acid is attached via a glycosidic bond to the substance, and the resulting glucuronide, which has a much higher water solubility than the original substance, is eventually excreted by the kidneys. [HMDB]</description>
  <synonyms>
    <synonym>(23S)-23,25-Dihdroxy-24-oxovitamine D3 23-(beta-glucuronoside)</synonym>
    <synonym>(23S)-23,25-Dihydroxy-24-oxocholecalciferol 23-(beta-glucuronide)</synonym>
    <synonym>(23S)-23,25-Dihydroxy-24-oxovitamin D3 23-(beta-glucuronide)</synonym>
    <synonym>(23S)-23,25-Dihydroxy-24-oxovitamine D3 23-(beta-glucuronoside)</synonym>
    <synonym>(5Z,7E)-(3S,23S)-24-Oxo-9,10-seco-5,7,10(19)-cholestatriene-3,23,25-triol 23-D-glucuronide</synonym>
    <synonym>(5Z,7E)-(3S,23S)-24-Oxo-9,10-seco-5,7,10(19)-cholestatriene-3,23,25-triol 23-delta-glucuronide</synonym>
  </synonyms>
  <chemical_formula>C33H50O10</chemical_formula>
  <average_molecular_weight>606.7441</average_molecular_weight>
  <monisotopic_moleculate_weight>606.34039782</monisotopic_moleculate_weight>
  <iupac_name>(2S,3S,4S,5R)-6-{[(4S,6R)-6-[(1R,3aS,7aR)-4-{2-[(5S)-5-hydroxy-2-methylidenecyclohexylidene]ethylidene}-7a-methyl-octahydro-1H-inden-1-yl]-2-hydroxy-2-methyl-3-oxoheptan-4-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid</iupac_name>
  <traditional_iupac>(2S,3S,4S,5R)-6-{[(4S,6R)-6-[(1R,3aS,7aR)-4-{2-[(5S)-5-hydroxy-2-methylidenecyclohexylidene]ethylidene}-7a-methyl-hexahydro-1H-inden-1-yl]-2-hydroxy-2-methyl-3-oxoheptan-4-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid</traditional_iupac>
  <cas_registry_number/>
  <smiles>[H][C@@](C)(C[C@]([H])(OC1O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)C(C)(C)O)[C@@]1([H])CC[C@@]2([H])C(CCC[C@]12C)=CC=C1C[C@@]([H])(O)CCC1=C</smiles>
  <inchi>InChI=1S/C33H50O10/c1-17-8-11-21(34)16-20(17)10-9-19-7-6-14-33(5)22(12-13-23(19)33)18(2)15-24(29(38)32(3,4)41)42-31-27(37)25(35)26(36)28(43-31)30(39)40/h9-10,18,21-28,31,34-37,41H,1,6-8,11-16H2,2-5H3,(H,39,40)/t18-,21+,22-,23+,24+,25+,26+,27-,28+,31?,33-/m1/s1</inchi>
  <inchikey>USYNZBLVOOXNSN-FACJVLNVSA-N</inchikey>
  <taxonomy>
    <description> belongs to the class of organic compounds known as 1-(1z-alkenyl),2-acylglycerophosphoethanolamines. These are glycerophosphoethanolamines that carry exactly one acyl chain attached to the glycerol moiety through an ester linkage at the O2-position,  and one 1Z-alkenyl chain attached through an ether linkage at the O1-position.</description>
    <direct_parent>1-(1Z-alkenyl),2-acylglycerophosphoethanolamines</direct_parent>
    <kingdom>Organic compounds</kingdom>
    <super_class>Lipids and lipid-like molecules</super_class>
    <class>Glycerophospholipids</class>
    <sub_class>Glycerophosphoethanolamines</sub_class>
    <molecular_framework>Aliphatic acyclic compounds</molecular_framework>
    <alternative_parents>
      <alternative_parent>Amino acids and derivatives</alternative_parent>
      <alternative_parent>Carbonyl compounds</alternative_parent>
      <alternative_parent>Carboxylic acid esters</alternative_parent>
      <alternative_parent>Dialkyl phosphates</alternative_parent>
      <alternative_parent>Fatty acid esters</alternative_parent>
      <alternative_parent>Glycerol vinyl ethers</alternative_parent>
      <alternative_parent>Hydrocarbon derivatives</alternative_parent>
      <alternative_parent>Monoalkylamines</alternative_parent>
      <alternative_parent>Monocarboxylic acids and derivatives</alternative_parent>
      <alternative_parent>Organic oxides</alternative_parent>
      <alternative_parent>Organopnictogen compounds</alternative_parent>
      <alternative_parent>Phosphoethanolamines</alternative_parent>
    </alternative_parents>
    <substituents>
      <substituent>1-(1z-alkenyl),2-acylglycerophosphoethanolamine</substituent>
      <substituent>Aliphatic acyclic compound</substituent>
      <substituent>Alkyl phosphate</substituent>
      <substituent>Amine</substituent>
      <substituent>Amino acid or derivatives</substituent>
      <substituent>Carbonyl group</substituent>
      <substituent>Carboxylic acid derivative</substituent>
      <substituent>Carboxylic acid ester</substituent>
      <substituent>Dialkyl phosphate</substituent>
      <substituent>Fatty acid ester</substituent>
      <substituent>Fatty acyl</substituent>
      <substituent>Glycerol vinyl ether</substituent>
      <substituent>Hydrocarbon derivative</substituent>
      <substituent>Monocarboxylic acid or derivatives</substituent>
      <substituent>Organic nitrogen compound</substituent>
      <substituent>Organic oxide</substituent>
      <substituent>Organic oxygen compound</substituent>
      <substituent>Organic phosphoric acid derivative</substituent>
      <substituent>Organonitrogen compound</substituent>
      <substituent>Organooxygen compound</substituent>
      <substituent>Organopnictogen compound</substituent>
      <substituent>Phosphoethanolamine</substituent>
      <substituent>Phosphoric acid ester</substituent>
      <substituent>Primary aliphatic amine</substituent>
      <substituent>Primary amine</substituent>
    </substituents>
    <external_descriptors>
    </external_descriptors>
  </taxonomy>
  <state>Solid</state>
  <predicted_properties>
    <property>
      <kind>logp</kind>
      <value>2.73</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>logs</kind>
      <value>-3.87</value>
      <source>ALOGPS</source>
    </property>
    <property>
      <kind>solubility</kind>
      <value>8.17e-02 g/l</value>
      <source>ALOGPS</source>
    </property>
  </predicted_properties>
  <experimental_properties>
  </experimental_properties>
  <property>
    <kind>logp</kind>
    <value>2.82</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_acidic</kind>
    <value>3.53</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>pka_strongest_basic</kind>
    <value>-1.3</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>iupac</kind>
    <value>(2S,3S,4S,5R)-6-{[(4S,6R)-6-[(1R,3aS,7aR)-4-{2-[(5S)-5-hydroxy-2-methylidenecyclohexylidene]ethylidene}-7a-methyl-octahydro-1H-inden-1-yl]-2-hydroxy-2-methyl-3-oxoheptan-4-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>average_mass</kind>
    <value>606.7441</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>mono_mass</kind>
    <value>606.34039782</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>smiles</kind>
    <value>[H][C@@](C)(C[C@]([H])(OC1O[C@]([H])(C(O)=O)[C@@]([H])(O)[C@]([H])(O)[C@@]1([H])O)C(=O)C(C)(C)O)[C@@]1([H])CC[C@@]2([H])C(CCC[C@]12C)=CC=C1C[C@@]([H])(O)CCC1=C</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formula</kind>
    <value>C33H50O10</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchi</kind>
    <value>InChI=1S/C33H50O10/c1-17-8-11-21(34)16-20(17)10-9-19-7-6-14-33(5)22(12-13-23(19)33)18(2)15-24(29(38)32(3,4)41)42-31-27(37)25(35)26(36)28(43-31)30(39)40/h9-10,18,21-28,31,34-37,41H,1,6-8,11-16H2,2-5H3,(H,39,40)/t18-,21+,22-,23+,24+,25+,26+,27-,28+,31?,33-/m1/s1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>inchikey</kind>
    <value>USYNZBLVOOXNSN-FACJVLNVSA-N</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polar_surface_area</kind>
    <value>173.98</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>refractivity</kind>
    <value>159.37</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>polarizability</kind>
    <value>65.58</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>rotatable_bond_count</kind>
    <value>9</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>acceptor_count</kind>
    <value>10</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>donor_count</kind>
    <value>6</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>physiological_charge</kind>
    <value>-1</value>
    <source>ChemAxon</source>
  </property>
  <property>
    <kind>formal_charge</kind>
    <value>0</value>
    <source>ChemAxon</source>
  </property>
  <pathways>
  </pathways>
  <spectra>
  </spectra>
  <hmdb_id>HMDB10361</hmdb_id>
  <pubchem_compound_id/>
  <chemspider_id/>
  <kegg_id/>
  <chebi_id/>
  <biocyc_id/>
  <het_id/>
  <wikipidia/>
  <vmh_id/>
  <fbonto_id/>
  <foodb_id/>
  <general_references>
  </general_references>
  <foods>
  </foods>
  <flavors>
  </flavors>
  <enzymes>
    <enzyme>
      <name>Beta-glucuronidase</name>
      <uniprot_id>P08236</uniprot_id>
      <uniprot_name/>
      <gene_name>GUSB</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-1</name>
      <uniprot_id>P22309</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A1</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-3</name>
      <uniprot_id>P35503</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A3</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-4</name>
      <uniprot_id>P22310</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A4</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-5</name>
      <uniprot_id>P35504</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A5</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-6</name>
      <uniprot_id>P19224</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A6</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 1-9</name>
      <uniprot_id>O60656</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT1A9</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2A1</name>
      <uniprot_id>Q9Y4X1</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2A1</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2A3</name>
      <uniprot_id>Q6UWM9</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2A3</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B11</name>
      <uniprot_id>O75310</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B11</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B15</name>
      <uniprot_id>P54855</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B15</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B17</name>
      <uniprot_id>O75795</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B17</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B28</name>
      <uniprot_id>Q9BY64</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B28</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B4</name>
      <uniprot_id>P06133</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B4</gene_name>
    </enzyme>
    <enzyme>
      <name>UDP-glucuronosyltransferase 2B7</name>
      <uniprot_id>P16662</uniprot_id>
      <uniprot_name/>
      <gene_name>UGT2B7</gene_name>
    </enzyme>
  </enzymes>
  <health_effects>
  </health_effects>
</compound>
